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Zakład Chemii Biologicznej - Publikacje


  • Kochańczyk, T.,  Nowakowski, M., Wojewska, D., Kocyła, A., Ejchart, A., Koźmiński, W., Krężel, A. (2016) Metal-coupled folding as the driving force for the extreme stability of Rad50 zinc hook dimer assembly. Sci. Rep., 6, 36346.
  • Żurawik, T.M., Pomorski, A., Belczyk-Ciesielska, A., Goch, G., Niedźwiedzka, K., Kucharczyk, R., Krężel, A., Bal, W. (2016) Revisiting mitochondrial pH with an improved algorithm for calibration of the ratiometric 5(6)-carboxy-SNARF-1 probe reveals anticooperative reaction with H+ ions and warrants further studies of organellar pH. PLoS ONE, 11, e016135.
  • Marszałek, I., Krężel, A., Goch, W., Zhukov, I., Paczkowska, I., Bal, W. (2016) Revised stability constant, spectroscopic properties and binding mode of Zn(II) to FluoZin-3, the most common zinc probe in life sciences. J. Inorg. Biochem., 161, 107-114.
  • Krężel, A., Maret, W. (2016) The biological inorganic chemistry of zinc ions. Arch. Biochem. Biophys., 611, 3-19.
  • Wezynfeld, N.E., Stefaniak, E., Stachucy, K., Drozd, A., Płonka, D., Drew, S.C.,  Krężel, A., Bal, W. (2016) Resistance of Cu(Aβ4-16) to copper capture by metallothionein-3 supports a function of Aβ4-42 peptide as synaptic CuII scavenger. Angew. Chem. Int. Ed. Engl., 55, 8235-8238.
  • Kocyła, A., Pomorski, A, Krężel, A. (2015) Molar absorption coefficients and stability constants of metal complexes of 4-(2-pyridylazo)resorcinol (PAR): Revisiting common chelating probe for the study of metalloproteins. J. Inorg. Biochem., 152, 82-92.
  • Adamczyk, J., Bal, W., Krężel, A. (2015) Coordination properties of dithiobutylamine (DTBA), a newly introduced protein disulfide-reducing agent. Inorg. Chem., 54, 596-606.
  • Hohl, M., Kochańczyk, T., Tous, C., Aguilera, A., Krężel, A., Petrini, J.H.J. (2015) The Rad50 hook domain is a global regulator of Mre11 complex functions. Mol. Cell, 57, 479-491.
  • Pomorski, A., Adamczyk, J., Bishop, A.C., Krężel, A. (2015) Probing the target-specific inhibition of sensitized protein tyrosine phosphatases with biarsenical probes. Org. Biomol. Chem. 13, 1395–1403.
  • Kochańczyk, T., Drozd, A., Krężel, A. (2015) Relationship between the architecture of zinc coordination and zinc binding affinity in proteins – insights into zinc regulation Metallomics, 7, 244-257. Front cover article
  • Miłoch, A., Krężel, A. (2014) Metal binding properties of zinc finger metallome – insights into variations in stability . Metallomics 6, 2015-2024. Front cover article
  • Krężel, A. (2014) Metal Ions in Life Sciences, Vol. 12: Metallomics and the Cell. ChemBioChem 15, 473-474.
  • Poręba, M., Mihelic, M., Krai, P., Rajkovic, J., Krężel, A., Pawełczak, M., Klemba, M., Turk, D., Turk, B., Latajka, R., Drąg, M. (2014) Unnatural amino acids increase activity and specificity of synthetic substrates for human and malarial cathepsin C. Amino Acids 46, 931-943.
  • Krężel, A. (2014) Biarsenical probes for specific and multifunctional modification of proteins. Postepy Biochem. 60, 102-110.
  • Pomorski, A., Kochańczyk, T., Miłoch, A., Krężel, A. (2013) Method for accurate determination of dissociation constants of optical ratiometric systems: chemical probes, genetically encoded sensors and interacting molecules. Anal. Chem. 85, 11479–11486.
  • Kochańczyk, T., Jakimowicz, P., Krężel, A. (2013) Femtomolar Zn(II) affinity of minimal zinc hook peptides – a promising small tag for protein engineering. Chem. Commun. (Camb.) (2013) 49, 1312-1314.
  • Krężel, A. (2013) Biarsenical fluorescent probes. V.N. Uversky, R.H. Kretsinger, E.A. Permyakov (eds.), Encyclopedia of Metalloproteins, 257-263, Springer Science+Business Media, LLC 2013.
  • Jewgiński M., Latajka, R., Krężel, A., Haremza, K., Makowski, M., Kafarski, P. (2013) Influence of solvents on conformation of dehydropeptides. J. Mol. Struct. 1035, 129-139.
  • Sikorska M., Krężel, A., Otlewski J (2012) Femtomolar Zn2+ affinity to LIM domain of PDLIM1 protein uncovers crucial contribution of protein-protein interactions to protein stability. J. Inorg. Biochem. 115, 28-35.
  • Krężel, A. Lisowski J. (2012) Enantioselective cleavage of supercoiled DNA catalysed by chiral macrocyclic lanthanide(III) complexes. J. Inorg. Biochem. 107, 1-5.
  • Hubberten, H.M., Drozd, A., Tran, B.V., Hesse, H., Hoefgen, R. (2012) Local and systemic regulation of sulfur homeostasis in roots of Arabidopsis thaliana. Plant J. 72, 625-635.
  • Pan, E., Zhang, X., Huang, Z., Krężel, A., Zhao, M., Tinberg, C.E., Lippard, S.J., McNamara, J.O. (2011) Vesicular zinc promotes presynaptic and inhibits postsynaptic long term potentiation of the hippocampal mossy fiber-CA3 synapse. Neuron 71, 1116-1126.
  • Pomorski, A, Krężel A. (2011) Exploration of biarsenical chemistry – challenges in protein research. ChemBioChem 12, 1152-1167.
  • Czepczyńska-Krężel, H., Czerwiński, M., Krężel, A., Krop-Wątorek, A. (2011) Formation of soluble aggregates by the N-terminal domains (N-A1) of carcinoembryonic antigen fused to maltose-binding protein. Protein Exp. Purif. 78, 78-85.
  • Krężel, A., Wójcik, J., Maciejczyk, M., Bal, W. (2011) Zn(II) complexes of glutathione disulfide: structural basis of elevated stabilities. Inorg. Chem. 50, 72-85.
  • Pomorski, A., Otlewski, J., Krężel, A. (2010) The high Zn(II) affinity of tetracysteine tag affects its fluorescent labeling with biarsenicals. ChemBioChem 11, 1214-1218.
  • Kopera, E., Krężel, A., Protas, A.M., Belczyk, A., Bonna, A., Wysłouch-Cieszyńska, A., Poznański, J., Bal, W. (2010) Sequence-specific Ni(II)-dependent peptide bond hydrolysis for protein engineering: reaction conditions and molecular mechanism, Inorg. Chem. 49, 6636-6645.
  • Krężel, A., Kopera, E., Protas, A.M., Poznański, J., Wysłouch-Cieszyńska, A., Bal, W. (2010) Sequence-specific Ni(II)-dependent peptide bond hydrolysis for protein engineering. Combinatorial library determination of optimal sequences, J. Am. Chem. Soc. 132, 401-409.