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Department of Biophysics

Selected publications

  1. Joanna Grzyb, Katarzyna Walczewska-Szewc, Jakub Sławski, Martyna Trojnar (2021) Quantum dot clusters as self-assembled antennae with phycocyanine and phycobilisomes as energy acceptors. Phys. Chem. Chem. Phys., 23, 24505-24517
  2. Joanna Wójtowicz, Joanna Grzyb, Joanna Szach, Radosław Mazur, Katarzyna B Gieczewska (2021) Bean and Pea Plastoglobules Change in Response to Chilling Stress. Int. J. Mol. Sci. 22, 11985
  3. Małgorzata Rydzy, Michał Tracz, Piotr Kolesiński, Andrzej Szczepaniak (2021) Białka chaperonowe zaangażowane w proces biosyntezy Rubisco. Postepy Biochemii 67.
  4. Karolina Wójtowicz, Aleksander Czogalla, Tomasz Trombik, Marcin Łukaszewicza (2021) Surfactin cyclic lipopeptides change the plasma membrane composition and lateral organization in mammalian cells. BBA-Biomembranes 1863, 183730.
  5. Małgorzata Rydzy, Michał Tracz, Andrzej Szczepaniak, Joanna Grzyb (2021) Insights into the Structure of Rubisco from Dinoflagellates-in Silico Studies. Int. J. Mol. Sci. 22, 8524
  6. Olga Raducka-Jaszul, Karolina Wójtowicz, Aleksander F. Sikorski, Giovanna Chimni, Yannick Hammon, Tomasz Trombik (2021) Molecular Diffusion of ABCA1 at the Cell Surface of Living Cells Assessed by svFCS. Membranes, 11, 298. 
  7. Jakub Sławski, Rafał Białek, Gotard Burdziński, Krzysztof Gibasiewicz, Remigiusz Worch, Joanna Grzyb (2021) Competition between Photoinduced Electron Transfer and Resonance Energy Transfer in an Example of Substituted Cytochrome c–Quantum Dot Systems. J. Phys. Chem. B, 125, 3307–3320
  8. Michał Tracz, Ireneusz Górniak, Andrzej Szczepaniak, Wojciech Białek (2021) E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein. Int. J. Mol. Sci. 22, 5712
  9. Aleksandra Eckstein, Joanna Grzyb, Paweł Hermanowicz, Piotr Zgłobicki, Justyna Łabuz, Wojciech Strzałka, Dariusz Dziga, Agnieszka Katarzyna Banaś (2021) Arabidopsis Phototropins Participate in the Regulation of Dark-Induced Leaf Senescence. Int. J. Mol. Sci. 22, 1836.
  10. Michał Tracz, Wojciech Białek (2021) Beyond K48 and K63: non-canonical protein ubiquitination. Cell. Mol. Biol. Lett. 26, 1. 
  11. Katarzyna Gieczewska, Joanna Grzyb, Bioczujniki i bionanourządzenia – przyszłość czy ślepa uliczka? w: Technologie XXI wieku – aktualne problemy i nowe wyzwania. Wydawnictwo Naukowe TYGIEL sp. z o.o. 2020, str. 1159-182.
  12. Sebastien Mailfert, Karolina Wojtowicz, Sophie Brustlein, Ewa Blaszczak, Nicolas Bertaux, Marcin Łukaszewicz, Didier Marguet, Tomasz Trombik (2020) Spot Variation Fluorescence Correlation Spectroscopy for Analysis of Molecular Diffusion at the Plasma Membrane of Living Cells. JoVE Journal, doi: 10.3791/61823
  13. Ewa Maciaszczyk-Dziubinska, Anna Reymer, Nallani Vijay Kumar, Wojciech Białek, Katarzyna Mizio, Markus J Tamás, Robert Wysocki (2020) The ancillary N-terminal region of the yeast AP-1 transcription factor Yap8 contributes to its DNA binding specificity.  Nuc. Acids Res.  48, 5426–5441.
  14. Ambroise Wu, Karolina Wójtowicz, Stephane Savary, Yannick Hamon, Tomasz Trombik (2020)  Do ABC transporters regulate plasma membrane organization? Cell. Mol. Biol. Lett. 25, 37.
  15. Jakub Sławski, Joanna Grzyb (2019) Nanoparticles as energy donors and acceptors in bionanohybrid systems. Acta Biochim. Pol. 66, 469-481. 
  16. Olga Sztatelman, Katarzyna Kopeć, Marta Pędziwiatr, Martyna Trojnar, Remigiusz Worch, Beata Wilegus-Kutrowska, Małgorzata Jemioła-Rzemińska, Agnieszka Bzowska, Joanna Grzyb (2019) Heterodimerizing helices as tools for nanoscale control of the organization of protein-protein and protein-quantum dots. Biochimie 167,93-105 
  17. Katarzyna Kopeć, Marta Pędziwiatr, Dominik Gront, Olga Sztatelman, Jakub Sławski, Magdalena Łazicka, Remigiusz Worch, Katarzyna Zawada, Katerina Makarova, Marcin Nyk, Joanna Grzyb (2019) Comparison of α-Helix and β-Sheet Structure Adaptation to a Quantum Dot Geometry: Toward the Identification of an Optimal Motif for a Protein Nanoparticle Cover. ACS Omega. 4:13086-13099
  18. Ambroise Wu, Ewa Grela, Karolina Wójtowicz, Nina Filipczak, Yannick Hammon, Rafał Luchowski, Wojciech Grudziński, Olga Raducka-Jaszul, Mariusz Gagoś, Andrzej Szczepaniak, Giovanna Chimini, Wiesław I. Gruszecki, Tomasz Trombik (2019) Cel. Mol. Life Sci. 76, 4979–4994
  19. Magda A Antoniak, Joanna Grzyb, Marcin Nyk (2019) Preserved Two-photon Optical Properties of Hydrophilic Proteins-Conjugated Quantum Dots. J. Luminescence 209:57-60.
  20. Paulina Piotrowska, Magdalena Łazicka, Adriana Palińska-Saadi, Bohdan Paterczyk, Łucja Kowalewska, Joanna Grzyb, Magdalena Maj-Żurawska, Maciej Garstka (2019) Electrochemical characterization of LHCII on graphite electrodes – Potential-dependent photoactivation and arrangement of complexes. Bioelectrochemistry 127, 37-48.
  21. Aleksandra Eckstein, Joanna Grzyb, Paweł Hermanowicz, A. Katarzyna Banaś (2019) Acta Biochim. Pol. 66, 243-248.
  22. Joanna Grzyb, Katarzyna Gieczewska, Justyna Łabuz, Olga Sztatelman (2018) Detailed characterization of Synechocystis PCC 6803 ferredoxin: NADP+ oxidoreductase interaction with model membranes. BBA-Biomembranes 1860:281-291.
  23. Piotr Kolesiński, Małgorzata Rydzy, Andrzej Szczepaniak (2017) Is RAF1 protein from Synechocystis sp. PCC 6803 really needed in the cyanobacterial Rubisco assembly process? Photosynth. Res. 132:135-148.
  24. Pawel Zatwarnicki, Jakub Barciszewski, Szymon Krzywda, Mariusz Jaskólski, Piotr Kolesiński, Andrzej Szczepaniak (2013) Cytochrome c6B of Synechococcus sp. WH 8102 – crystal structure and basic properties of novel c6-like family representative.  Biochem. Biophys. Res. Commun. 443:1131–1135.
  25. Piotr Kolesiński, Przemyslaw Golik, Przemyslaw Grudnik, Janusz Piechota, Michal Markiewicz, Miroslaw Tarnawski, Grzegorz Dubin, Andrzej Szczepaniak (2013) Insights into eukaryotic Rubisco assembly – Crystal structures of RbcX chaperones from Arabidopsis thaliana. Biochim. Biophys. Acta 1830: 2899-2906.
  26. Piotr Kolesiński, Janusz Piechota, Andrzej Szczepaniak (2011) Initial Characteristic of RbcX proteins from Arabidopsis thaliana. Plant. Mol. Biol. 77: 447-459.
  27. Miroslaw Tarnawski, Szymon Krzywda, Wojciech Białek, Mariusz Jaskólski and Andrzej Szczepaniak (2011) Structure of the RuBisCO chaperone RbcX from the thermophilic cyanobacterium Thermosynechococcus elongatus. Acta Crystallographica Section F67, 851-857.
  28. Króliczewski J., Gubernator B., Roegner M., Szczepaniak A. (2011)  On the mode of integration of the thylakoid membrane protein cytochrome b6 into cytoplasmic membrane of Escherichia coli. Acta Biochem. Pol. 58(3):335-343.
  29. Białek W, Krzywda S, Jaskólski M, Szczepaniak A. (2009) Atomic-resolution of reduced cyanobacterial cytochrome c6 with an unusual sequence insertion. FEBS J. 276: 4426-4436.
  30. Tarnawski M, Gubernator B, Kolesinski P, Szczepaniak A. (2008) Expression and initial characterization of a recombinant RbcX protein from Thermosynechococcus elongatus BP-1, the role of RbcX in RuBisCO assembly. Acta Biochem. Pol. 55
  31. Tarnawski M, Krzywda S, Szczepaniak A, Jaskolski M. (2008) Rational `correction` of the amino-acid seqence of RbcX protein from the thermophilic cyanobacterium Thermosynechococcus elongatus dramatically improves crystallization. Acta Cryst. F64: 870-874.
  32. Bialek W, Nelson M, Tamiola K, Kallas T, Szczepaniak A. (2008) Deeply Branching c6-like Cytochromem of Cyanobacteria. Biochemistry 47: 5515-5522.
  33. Gubernator B, Bartoszewski R, Króliczewski J, Wildner G, Szczepaniak A. (2008) Ribulose-1,5-bisphosphate carboxylase/oxygenase from thermophilic cyanobacterium Thermosynechococcus elongatus. Photosynth. Res. 95: 101-109.
  34. Gubernator B, Króliczewski J, Kallas T, Szczepaniak A. (2006) Iron-sulfur cluster reconstitution of spinach chloroplast Rieske protein requires a partially prefolded apoprotein. Biochim. Biophys. Acta 1764: 735-742.
  35. Króliczewski J.,Hombek-Urban K., Szczepaniak A. (2005) The integration of the thylakoid membrane protein cytochrome b6 in the cytoplasmic membrane of Escherichia coil. Biochemistry 44: 7570-7576.
  36. Gubernator B., Seidler A., Rogner M., Szczepaniak A. (2003) Overexpression and Reconstitution of a Rieske Iron-Sulfur Protein from the Higher Plant. Protein Expr Purif 29: 8-14.
  37. Wildner G., Schlitter J., Szczepaniak A., Bartoszewski R. (2002). Rubisco of a thermophilic cyanobacterium Thermosynechococcus elonogatus. W: Recent Research Development in Biotechnology and Bioengeneering, Special issue: Biotechnology and Bioengeneering of CO2 fixation. (S.J. Bhattacharya, T. Mal, S. Chakrabarti, eds.,):73-88.
  38. Króliczewski j., Szczepaniak A. (2002) In vitro reconstitution of the spinach chloroplast cytochrome b6 protein from a fusion protein expressed in Escherichia coli. Biochim. Biophys. Acta 1598: 177-184.
  39. Martinez S.E., Huang D., Szczepaniak A., Cramer W.A., Smith J.L. (1994) Crystal Structure of the Chloroplast Cytochrome f Reveals a Novel Cytochrome Fold and Unexpected Heme Ligation. Structure 2, 95-105